Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubr7Q8BU04 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ubr7Q8BU04 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubr7Q8BU04 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubr7Q8BU04 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubr7Q8BU04 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Ubr7Q8BU04 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ubr7Q8BU04 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.26■□□□□ 0.19
Ubr7Q8BU04 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ubr7Q8BU04 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Gm8097-201ENSMUST00000117903 829 ntBASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Gm4535-201ENSMUST00000182274 558 ntBASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Gm10355-201ENSMUST00000097146 517 ntBASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr7Q8BU04 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr7Q8BU04 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms