Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Gm2274-201ENSMUST00000184539 609 ntBASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ckap4Q8BMK4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ckap4Q8BMK4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ckap4Q8BMK4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Ckap4Q8BMK4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ckap4Q8BMK4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ckap4Q8BMK4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ckap4Q8BMK4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Gm13474-201ENSMUST00000122466 815 ntBASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.32■□□□□ 0.04
Ckap4Q8BMK4 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ckap4Q8BMK4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms