Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smg1Q8BKX6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.61□□□□□ -0.23
Smg1Q8BKX6 Gm43630-201ENSMUST00000201550 776 ntBASIC13.61□□□□□ -0.23
Smg1Q8BKX6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.61□□□□□ -0.23
Smg1Q8BKX6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smg1Q8BKX6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smg1Q8BKX6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smg1Q8BKX6 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.61□□□□□ -0.23
Smg1Q8BKX6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Gm6912-201ENSMUST00000117218 544 ntBASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.6□□□□□ -0.23
Smg1Q8BKX6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Gm25948-201ENSMUST00000175334 112 ntBASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.6□□□□□ -0.23
Smg1Q8BKX6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Mir449b-201ENSMUST00000104833 80 ntBASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Gm45747-201ENSMUST00000212203 999 ntBASIC13.59□□□□□ -0.23
Smg1Q8BKX6 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Gm25406-201ENSMUST00000157599 105 ntBASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Gm45612-201ENSMUST00000211320 160 ntBASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smg1Q8BKX6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smg1Q8BKX6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smg1Q8BKX6 Gm17271-201ENSMUST00000165535 355 ntBASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smg1Q8BKX6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smg1Q8BKX6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms