Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdh20Q8BIZ0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh20Q8BIZ0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Gm21559-201ENSMUST00000220638 855 ntBASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Gm8587-201ENSMUST00000076538 843 ntBASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh20Q8BIZ0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 AA414768-201ENSMUST00000121924 1257 ntBASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh20Q8BIZ0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms