Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc40Q8BI79 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Gm44450-201ENSMUST00000199528 114 ntBASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc40Q8BI79 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Gm26039-201ENSMUST00000158152 144 ntBASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Gm10566-201ENSMUST00000086739 996 ntBASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc40Q8BI79 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms