Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Gm30025-201ENSMUST00000218555 728 ntBASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf38Q8BI21 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Gm27463-201ENSMUST00000183569 57 ntBASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf38Q8BI21 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Gm18115-201ENSMUST00000221209 621 ntBASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf38Q8BI21 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Gm18421-201ENSMUST00000204122 625 ntBASIC15.61■□□□□ 0.09
Rnf38Q8BI21 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf38Q8BI21 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms