Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn3bQ8BHK2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn3bQ8BHK2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn3bQ8BHK2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn3bQ8BHK2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Gm10849-201ENSMUST00000100397 618 ntBASIC15.08■□□□□ 0
Scn3bQ8BHK2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Gm9731-201ENSMUST00000209480 747 ntBASIC15.08■□□□□ 0
Scn3bQ8BHK2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn3bQ8BHK2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Gm12896-201ENSMUST00000118430 226 ntBASIC15.07■□□□□ 0
Scn3bQ8BHK2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn3bQ8BHK2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Gm18958-201ENSMUST00000174258 762 ntBASIC15.06■□□□□ 0
Scn3bQ8BHK2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Scn3bQ8BHK2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Scn3bQ8BHK2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scn3bQ8BHK2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Scn3bQ8BHK2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scn3bQ8BHK2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Scn3bQ8BHK2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ 0
Scn3bQ8BHK2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scn3bQ8BHK2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms