Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SpidrQ8BGX7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SpidrQ8BGX7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SpidrQ8BGX7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SpidrQ8BGX7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Mir8117-201ENSMUST00000184773 107 ntBASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.76■□□□□ 0.59
SpidrQ8BGX7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Gm37153-201ENSMUST00000193637 231 ntBASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Gm45167-201ENSMUST00000208007 322 ntBASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SpidrQ8BGX7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.74■□□□□ 0.59
SpidrQ8BGX7 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.74■□□□□ 0.59
SpidrQ8BGX7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpidrQ8BGX7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Gm8344-201ENSMUST00000119813 856 ntBASIC18.73■□□□□ 0.59
SpidrQ8BGX7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SpidrQ8BGX7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms