Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trnp1Q80ZI1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Gm13365-201ENSMUST00000121188 973 ntBASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Gm44335-201ENSMUST00000196879 141 ntBASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Gm44297-201ENSMUST00000198304 141 ntBASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Gm44346-201ENSMUST00000198851 141 ntBASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Gm45747-201ENSMUST00000212203 999 ntBASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trnp1Q80ZI1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Gm27301-201ENSMUST00000184012 127 ntBASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trnp1Q80ZI1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trnp1Q80ZI1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trnp1Q80ZI1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.14■□□□□ 0.49
Trnp1Q80ZI1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Gm5177-201ENSMUST00000183092 997 ntBASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Mir7023-201ENSMUST00000185093 64 ntBASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trnp1Q80ZI1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms