Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nrde2Q80XC6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nrde2Q80XC6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Gm11594-201ENSMUST00000122313 162 ntBASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nrde2Q80XC6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nrde2Q80XC6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44357-201ENSMUST00000195897 142 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm19658-201ENSMUST00000196231 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44367-201ENSMUST00000196836 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44350-201ENSMUST00000197197 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44390-201ENSMUST00000197533 144 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44313-201ENSMUST00000198018 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44486-201ENSMUST00000198508 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44314-201ENSMUST00000199263 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44394-201ENSMUST00000199558 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44484-201ENSMUST00000199873 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44466-201ENSMUST00000200264 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm44359-201ENSMUST00000200671 138 ntBASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nrde2Q80XC6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms