Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Gm11355-201ENSMUST00000121120 306 ntBASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Gm10231-201ENSMUST00000181584 441 ntBASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Gm10175-202ENSMUST00000208752 441 ntBASIC15.84■□□□□ 0.13
Ccdc116Q80X53 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc116Q80X53 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc116Q80X53 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc116Q80X53 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.83■□□□□ 0.13
Ccdc116Q80X53 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc116Q80X53 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.83■□□□□ 0.13
Ccdc116Q80X53 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc116Q80X53 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc116Q80X53 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms