Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Auts2-212ENSMUST00000178555 309 ntBASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf40bQ80W14 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Gm4995-201ENSMUST00000117247 432 ntBASIC18.59■□□□□ 0.57
Prpf40bQ80W14 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Gm14494-201ENSMUST00000118786 435 ntBASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Gm27000-201ENSMUST00000182943 842 ntBASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf40bQ80W14 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf40bQ80W14 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf40bQ80W14 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf40bQ80W14 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf40bQ80W14 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Prpf40bQ80W14 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf40bQ80W14 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf40bQ80W14 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms