Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp8Q80U87 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp8Q80U87 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Usp8Q80U87 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp8Q80U87 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Gm7370-201ENSMUST00000219471 767 ntBASIC16.25■□□□□ 0.19
Usp8Q80U87 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Usp8Q80U87 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Usp8Q80U87 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp8Q80U87 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Gm16061-201ENSMUST00000122167 857 ntBASIC16.24■□□□□ 0.19
Usp8Q80U87 Gm13474-201ENSMUST00000122466 815 ntBASIC16.24■□□□□ 0.19
Usp8Q80U87 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Gm2274-201ENSMUST00000184539 609 ntBASIC16.24■□□□□ 0.19
Usp8Q80U87 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.24■□□□□ 0.19
Usp8Q80U87 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp8Q80U87 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Usp8Q80U87 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp8Q80U87 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp8Q80U87 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp8Q80U87 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Gm13186-201ENSMUST00000118031 316 ntBASIC16.23■□□□□ 0.19
Usp8Q80U87 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Usp8Q80U87 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.23■□□□□ 0.19
Usp8Q80U87 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp8Q80U87 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.23■□□□□ 0.19
Usp8Q80U87 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.22■□□□□ 0.19
Usp8Q80U87 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp8Q80U87 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp8Q80U87 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.22■□□□□ 0.19
Usp8Q80U87 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Usp8Q80U87 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.22■□□□□ 0.19
Usp8Q80U87 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.22■□□□□ 0.19
Usp8Q80U87 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Usp8Q80U87 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp8Q80U87 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp8Q80U87 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Usp8Q80U87 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Usp8Q80U87 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Gm11539-201ENSMUST00000119837 557 ntBASIC16.21■□□□□ 0.19
Usp8Q80U87 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms