Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf38bQ80SY5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Gm8097-201ENSMUST00000117903 829 ntBASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Prpf38bQ80SY5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf38bQ80SY5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf38bQ80SY5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf38bQ80SY5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf38bQ80SY5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf38bQ80SY5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms