Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.9□□□□□ -0.02
Pif1Q80SX8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pif1Q80SX8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.89□□□□□ -0.03
Pif1Q80SX8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pif1Q80SX8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.88□□□□□ -0.03
Pif1Q80SX8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Gm8000-201ENSMUST00000188378 592 ntBASIC14.88□□□□□ -0.03
Pif1Q80SX8 Gm7506-201ENSMUST00000207758 815 ntBASIC14.88□□□□□ -0.03
Pif1Q80SX8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.88□□□□□ -0.03
Pif1Q80SX8 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.88□□□□□ -0.03
Pif1Q80SX8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pif1Q80SX8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.87□□□□□ -0.03
Pif1Q80SX8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Gm5364-201ENSMUST00000216789 889 ntBASIC14.87□□□□□ -0.03
Pif1Q80SX8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pif1Q80SX8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms