Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf139Q7TMV1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rnf139Q7TMV1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf139Q7TMV1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Mir3081-201ENSMUST00000175305 84 ntBASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf139Q7TMV1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf139Q7TMV1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Gm17807-201ENSMUST00000186869 298 ntBASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf139Q7TMV1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf139Q7TMV1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Ank2-226ENSMUST00000189368 339 ntBASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf139Q7TMV1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms