Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vma21Q78T54 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.19□□□□□ -0.3
Vma21Q78T54 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.19□□□□□ -0.3
Vma21Q78T54 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.19□□□□□ -0.3
Vma21Q78T54 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vma21Q78T54 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.19□□□□□ -0.3
Vma21Q78T54 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vma21Q78T54 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vma21Q78T54 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vma21Q78T54 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Vma21Q78T54 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Phf7-203ENSMUST00000226565 1971 ntBASIC13.18□□□□□ -0.3
Vma21Q78T54 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.18□□□□□ -0.3
Vma21Q78T54 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.18□□□□□ -0.3
Vma21Q78T54 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.18□□□□□ -0.3
Vma21Q78T54 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.18□□□□□ -0.3
Vma21Q78T54 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Vma21Q78T54 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.18□□□□□ -0.3
Vma21Q78T54 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vma21Q78T54 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.18□□□□□ -0.3
Vma21Q78T54 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vma21Q78T54 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vma21Q78T54 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vma21Q78T54 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Vma21Q78T54 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Vma21Q78T54 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.17□□□□□ -0.3
Vma21Q78T54 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.17□□□□□ -0.3
Vma21Q78T54 Gm21814-202ENSMUST00000203277 873 ntBASIC13.17□□□□□ -0.3
Vma21Q78T54 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Gm10812-201ENSMUST00000099864 546 ntBASIC13.17□□□□□ -0.3
Vma21Q78T54 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.17□□□□□ -0.3
Vma21Q78T54 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vma21Q78T54 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.16□□□□□ -0.3
Vma21Q78T54 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.16□□□□□ -0.3
Vma21Q78T54 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vma21Q78T54 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vma21Q78T54 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vma21Q78T54 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 Gm11539-201ENSMUST00000119837 557 ntBASIC13.16□□□□□ -0.3
Vma21Q78T54 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vma21Q78T54 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms