Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Gm18733-201ENSMUST00000173950 856 ntBASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ubfd1Q78JW9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ubfd1Q78JW9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ubfd1Q78JW9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Gm13216-201ENSMUST00000117145 591 ntBASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ubfd1Q78JW9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Gm4459-201ENSMUST00000118750 468 ntBASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Gm4535-201ENSMUST00000182274 558 ntBASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Gm8655-201ENSMUST00000221159 852 ntBASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Gm10355-201ENSMUST00000097146 517 ntBASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubfd1Q78JW9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ubfd1Q78JW9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ubfd1Q78JW9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms