Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx55Q6ZPL9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.33■□□□□ 0.53
Ddx55Q6ZPL9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx55Q6ZPL9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx55Q6ZPL9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx55Q6ZPL9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.33■□□□□ 0.53
Ddx55Q6ZPL9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.33■□□□□ 0.53
Ddx55Q6ZPL9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx55Q6ZPL9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Gm15358-201ENSMUST00000119249 520 ntBASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Gm17968-201ENSMUST00000194902 784 ntBASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Gm44492-201ENSMUST00000197012 141 ntBASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx55Q6ZPL9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx55Q6ZPL9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Gm14057-201ENSMUST00000120631 482 ntBASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Gm13597-201ENSMUST00000121239 375 ntBASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx55Q6ZPL9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx55Q6ZPL9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms