Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx58Q6Q899 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx58Q6Q899 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Gm12350-201ENSMUST00000121208 462 ntBASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Gm6089-201ENSMUST00000197666 938 ntBASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.94■□□□□ 0.78
Ddx58Q6Q899 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.93■□□□□ 0.78
Ddx58Q6Q899 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Mir5126-201ENSMUST00000175513 77 ntBASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx58Q6Q899 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm15173-201ENSMUST00000122049 433 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm8825-201ENSMUST00000182565 998 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm4518-201ENSMUST00000182638 718 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx58Q6Q899 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx58Q6Q899 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx58Q6Q899 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.9■□□□□ 0.78
Ddx58Q6Q899 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms