Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Gm15565-201ENSMUST00000118890 427 ntBASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.98■□□□□ 0.47
Dhx40Q6PE54 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dhx40Q6PE54 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dhx40Q6PE54 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dhx40Q6PE54 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Dhx40Q6PE54 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.95■□□□□ 0.46
Dhx40Q6PE54 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms