Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm14701-201ENSMUST00000117156 348 ntBASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Gm17271-201ENSMUST00000165535 355 ntBASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Gm45167-201ENSMUST00000208007 322 ntBASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Snrnp40Q6PE01 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snrnp40Q6PE01 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Gm14057-201ENSMUST00000120631 482 ntBASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Gm11025-201ENSMUST00000140773 466 ntBASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Snrnp40Q6PE01 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Gm27300-201ENSMUST00000184085 97 ntBASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Gm27335-201ENSMUST00000184758 97 ntBASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Snrnp40Q6PE01 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms