Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf220Q6PDX6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf220Q6PDX6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Mtag2-201ENSMUST00000058665 714 ntBASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf220Q6PDX6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Dio3-201ENSMUST00000097228 1449 ntBASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf220Q6PDX6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf220Q6PDX6 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms