Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.91■□□□□ 0.46
Trim37Q6PCX9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim37Q6PCX9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim37Q6PCX9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim37Q6PCX9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim37Q6PCX9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim37Q6PCX9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Dancr-204ENSMUST00000132389 2347 ntBASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Gm11336-201ENSMUST00000118168 334 ntBASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim37Q6PCX9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Gm14494-201ENSMUST00000118786 435 ntBASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim37Q6PCX9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms