Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smarcd3Q6P9Z1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Phf7-203ENSMUST00000226565 1971 ntBASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd3Q6P9Z1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Gm18115-201ENSMUST00000221209 621 ntBASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd3Q6P9Z1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.83□□□□□ -0.03
Smarcd3Q6P9Z1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd3Q6P9Z1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd3Q6P9Z1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd3Q6P9Z1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Smarcd3Q6P9Z1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd3Q6P9Z1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd3Q6P9Z1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd3Q6P9Z1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd3Q6P9Z1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms