Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb4Q6P8W9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gm15372-201ENSMUST00000120729 834 ntBASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gm27867-201ENSMUST00000184778 125 ntBASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gm6443-201ENSMUST00000203599 874 ntBASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.9■□□□□ 0.3
Hmgb4Q6P8W9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgb4Q6P8W9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgb4Q6P8W9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgb4Q6P8W9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgb4Q6P8W9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Rprl3-201ENSMUST00000157400 290 ntBASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb4Q6P8W9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Gm43514-201ENSMUST00000198852 424 ntBASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb4Q6P8W9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.87■□□□□ 0.29
Hmgb4Q6P8W9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hmgb4Q6P8W9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb4Q6P8W9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb4Q6P8W9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb4Q6P8W9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.87■□□□□ 0.29
Hmgb4Q6P8W9 Gm13312-201ENSMUST00000119631 718 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms