Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smchd1Q6P5D8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smchd1Q6P5D8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smchd1Q6P5D8 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm8825-201ENSMUST00000182565 998 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm4518-201ENSMUST00000182638 718 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smchd1Q6P5D8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms