Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sp140Q6NSQ5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sp140Q6NSQ5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sp140Q6NSQ5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sp140Q6NSQ5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sp140Q6NSQ5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Sp140Q6NSQ5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sp140Q6NSQ5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms