Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm4518-201ENSMUST00000182638 718 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm37153-201ENSMUST00000193637 231 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scaf8Q6DID3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Gm36967-201ENSMUST00000193814 266 ntBASIC18.8■□□□□ 0.6
Scaf8Q6DID3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.8■□□□□ 0.6
Scaf8Q6DID3 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scaf8Q6DID3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scaf8Q6DID3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Mir1895-201ENSMUST00000122615 79 ntBASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scaf8Q6DID3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.77■□□□□ 0.6
Scaf8Q6DID3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.77■□□□□ 0.6
Scaf8Q6DID3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.77■□□□□ 0.59
Scaf8Q6DID3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.76■□□□□ 0.59
Scaf8Q6DID3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms