Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.33□□□□□ -0.28
Col7a1Q63870 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Gm45668-201ENSMUST00000211271 493 ntBASIC13.33□□□□□ -0.28
Col7a1Q63870 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col7a1Q63870 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col7a1Q63870 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm4518-201ENSMUST00000182638 718 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.32□□□□□ -0.28
Col7a1Q63870 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col7a1Q63870 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.32□□□□□ -0.28
Col7a1Q63870 Gm7787-201ENSMUST00000216858 688 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.32□□□□□ -0.28
Col7a1Q63870 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col7a1Q63870 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col7a1Q63870 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.31□□□□□ -0.28
Col7a1Q63870 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Col7a1Q63870 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Gm9385-201ENSMUST00000117563 472 ntBASIC13.31□□□□□ -0.28
Col7a1Q63870 Gm23984-201ENSMUST00000157139 203 ntBASIC13.31□□□□□ -0.28
Col7a1Q63870 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Gm45331-201ENSMUST00000209868 554 ntBASIC13.31□□□□□ -0.28
Col7a1Q63870 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.31□□□□□ -0.28
Col7a1Q63870 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col7a1Q63870 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.31□□□□□ -0.28
Col7a1Q63870 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col7a1Q63870 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.31□□□□□ -0.28
Col7a1Q63870 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.31□□□□□ -0.28
Col7a1Q63870 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col7a1Q63870 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.3□□□□□ -0.28
Col7a1Q63870 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.3□□□□□ -0.28
Col7a1Q63870 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col7a1Q63870 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col7a1Q63870 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col7a1Q63870 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col7a1Q63870 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col7a1Q63870 Gm6415-201ENSMUST00000118488 348 ntBASIC13.29□□□□□ -0.28
Col7a1Q63870 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.29□□□□□ -0.28
Col7a1Q63870 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col7a1Q63870 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col7a1Q63870 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col7a1Q63870 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.29□□□□□ -0.28
Col7a1Q63870 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms