Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Six2Q62232 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Six2Q62232 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.24■□□□□ 0.35
Six2Q62232 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six2Q62232 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.24■□□□□ 0.35
Six2Q62232 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.23■□□□□ 0.35
Six2Q62232 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.23■□□□□ 0.35
Six2Q62232 Gm29518-201ENSMUST00000190858 372 ntBASIC17.23■□□□□ 0.35
Six2Q62232 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.23■□□□□ 0.35
Six2Q62232 Gm17808-201ENSMUST00000200859 894 ntBASIC17.23■□□□□ 0.35
Six2Q62232 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Six2Q62232 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Six2Q62232 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six2Q62232 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Six2Q62232 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Six2Q62232 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Six2Q62232 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Six2Q62232 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Gm15794-201ENSMUST00000120182 631 ntBASIC17.22■□□□□ 0.35
Six2Q62232 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Six2Q62232 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Six2Q62232 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Six2Q62232 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six2Q62232 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.21■□□□□ 0.35
Six2Q62232 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Six2Q62232 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.21■□□□□ 0.35
Six2Q62232 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.21■□□□□ 0.35
Six2Q62232 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.21■□□□□ 0.35
Six2Q62232 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Six2Q62232 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Six2Q62232 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Six2Q62232 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.21■□□□□ 0.35
Six2Q62232 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Six2Q62232 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Six2Q62232 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six2Q62232 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.21■□□□□ 0.35
Six2Q62232 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Six2Q62232 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Six2Q62232 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Six2Q62232 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Six2Q62232 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.2■□□□□ 0.34
Six2Q62232 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six2Q62232 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms