Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.86■□□□□ 0.77
Trim27Q62158 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim27Q62158 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim27Q62158 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.86■□□□□ 0.77
Trim27Q62158 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.86■□□□□ 0.77
Trim27Q62158 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim27Q62158 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim27Q62158 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trim27Q62158 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.85■□□□□ 0.77
Trim27Q62158 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim27Q62158 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.85■□□□□ 0.77
Trim27Q62158 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trim27Q62158 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim27Q62158 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim27Q62158 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim27Q62158 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim27Q62158 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.84■□□□□ 0.77
Trim27Q62158 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Trim27Q62158 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.84■□□□□ 0.77
Trim27Q62158 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim27Q62158 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim27Q62158 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
Trim27Q62158 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim27Q62158 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim27Q62158 Gm27742-201ENSMUST00000184667 60 ntBASIC19.83■□□□□ 0.77
Trim27Q62158 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim27Q62158 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim27Q62158 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim27Q62158 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim27Q62158 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim27Q62158 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trim27Q62158 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim27Q62158 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim27Q62158 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim27Q62158 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim27Q62158 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.82■□□□□ 0.76
Trim27Q62158 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Mir6404-201ENSMUST00000183699 94 ntBASIC19.82■□□□□ 0.76
Trim27Q62158 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.82■□□□□ 0.76
Trim27Q62158 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim27Q62158 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim27Q62158 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim27Q62158 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Trim27Q62158 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms