Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.02■□□□□ 0.63
Ctr9Q62018 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ctr9Q62018 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Ctr9Q62018 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Gm5864-201ENSMUST00000202263 970 ntBASIC19.01■□□□□ 0.63
Ctr9Q62018 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.01■□□□□ 0.63
Ctr9Q62018 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.01■□□□□ 0.63
Ctr9Q62018 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctr9Q62018 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ctr9Q62018 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Gm25745-201ENSMUST00000174945 133 ntBASIC19■□□□□ 0.63
Ctr9Q62018 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19■□□□□ 0.63
Ctr9Q62018 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19■□□□□ 0.63
Ctr9Q62018 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19■□□□□ 0.63
Ctr9Q62018 AC133598.3-202ENSMUST00000224219 531 ntBASIC19■□□□□ 0.63
Ctr9Q62018 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19■□□□□ 0.63
Ctr9Q62018 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ctr9Q62018 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctr9Q62018 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctr9Q62018 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctr9Q62018 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctr9Q62018 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.99■□□□□ 0.63
Ctr9Q62018 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.99■□□□□ 0.63
Ctr9Q62018 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctr9Q62018 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.99■□□□□ 0.63
Ctr9Q62018 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctr9Q62018 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctr9Q62018 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ctr9Q62018 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctr9Q62018 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Ctr9Q62018 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.98■□□□□ 0.63
Ctr9Q62018 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ctr9Q62018 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.98■□□□□ 0.63
Ctr9Q62018 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ctr9Q62018 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctr9Q62018 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
Ctr9Q62018 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.97■□□□□ 0.63
Ctr9Q62018 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ctr9Q62018 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctr9Q62018 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ctr9Q62018 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.96■□□□□ 0.63
Ctr9Q62018 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Ctr9Q62018 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ctr9Q62018 Gm13884-201ENSMUST00000118103 829 ntBASIC18.96■□□□□ 0.63
Ctr9Q62018 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Gm28659-201ENSMUST00000188013 759 ntBASIC18.96■□□□□ 0.63
Ctr9Q62018 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ctr9Q62018 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctr9Q62018 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms