Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gli3Q61602 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gli3Q61602 Gm27989-201ENSMUST00000184721 107 ntBASIC21.78■■□□□ 1.08
Gli3Q61602 CT025555.1-201ENSMUST00000225901 1217 ntBASIC21.78■■□□□ 1.08
Gli3Q61602 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Gli3Q61602 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Gli3Q61602 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Gm12008-201ENSMUST00000117791 755 ntBASIC21.77■■□□□ 1.08
Gli3Q61602 Gm15487-201ENSMUST00000122373 465 ntBASIC21.77■■□□□ 1.08
Gli3Q61602 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC21.77■■□□□ 1.08
Gli3Q61602 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Gli3Q61602 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Gli3Q61602 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gli3Q61602 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Gli3Q61602 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC21.76■■□□□ 1.07
Gli3Q61602 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Gli3Q61602 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC21.76■■□□□ 1.07
Gli3Q61602 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Gli3Q61602 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gli3Q61602 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC21.75■■□□□ 1.07
Gli3Q61602 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC21.75■■□□□ 1.07
Gli3Q61602 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC21.75■■□□□ 1.07
Gli3Q61602 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Gli3Q61602 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gli3Q61602 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gli3Q61602 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Gli3Q61602 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gli3Q61602 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gli3Q61602 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC21.74■■□□□ 1.07
Gli3Q61602 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gli3Q61602 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC21.74■■□□□ 1.07
Gli3Q61602 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gli3Q61602 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
Gli3Q61602 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gli3Q61602 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gli3Q61602 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Gli3Q61602 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Gli3Q61602 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Gli3Q61602 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gli3Q61602 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gli3Q61602 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gli3Q61602 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Gli3Q61602 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC21.73■■□□□ 1.07
Gli3Q61602 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Gli3Q61602 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gli3Q61602 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Gli3Q61602 Gm13410-201ENSMUST00000117058 1415 ntBASIC21.72■■□□□ 1.07
Gli3Q61602 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Gli3Q61602 Gm3365-201ENSMUST00000216296 1480 ntBASIC21.72■■□□□ 1.07
Gli3Q61602 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC21.72■■□□□ 1.07
Gli3Q61602 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Gli3Q61602 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC21.72■■□□□ 1.07
Gli3Q61602 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Gm45059-201ENSMUST00000205558 1077 ntBASIC21.72■■□□□ 1.07
Gli3Q61602 AC124732.1-201ENSMUST00000221551 910 ntBASIC21.72■■□□□ 1.07
Gli3Q61602 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.72■■□□□ 1.07
Gli3Q61602 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC21.72■■□□□ 1.07
Gli3Q61602 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Gm15163-201ENSMUST00000120749 1302 ntBASIC21.72■■□□□ 1.07
Gli3Q61602 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gli3Q61602 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Gli3Q61602 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gli3Q61602 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms