Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Zic4Q61467 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Zic4Q61467 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.13□□□□□ -0.31
Zic4Q61467 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Zic4Q61467 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.13□□□□□ -0.31
Zic4Q61467 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zic4Q61467 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Zic4Q61467 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.12□□□□□ -0.31
Zic4Q61467 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.12□□□□□ -0.31
Zic4Q61467 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.12□□□□□ -0.31
Zic4Q61467 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Zic4Q61467 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.12□□□□□ -0.31
Zic4Q61467 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.12□□□□□ -0.31
Zic4Q61467 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Zic4Q61467 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Gm36967-201ENSMUST00000193814 266 ntBASIC13.12□□□□□ -0.31
Zic4Q61467 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.12□□□□□ -0.31
Zic4Q61467 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.12□□□□□ -0.31
Zic4Q61467 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zic4Q61467 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Zic4Q61467 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.11□□□□□ -0.31
Zic4Q61467 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.11□□□□□ -0.31
Zic4Q61467 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zic4Q61467 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Zic4Q61467 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Zic4Q61467 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Zic4Q61467 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zic4Q61467 Gm27275-201ENSMUST00000184318 272 ntBASIC13.11□□□□□ -0.31
Zic4Q61467 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.11□□□□□ -0.31
Zic4Q61467 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zic4Q61467 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zic4Q61467 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zic4Q61467 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zic4Q61467 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zic4Q61467 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zic4Q61467 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zic4Q61467 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zic4Q61467 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zic4Q61467 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.1□□□□□ -0.31
Zic4Q61467 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zic4Q61467 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zic4Q61467 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.1□□□□□ -0.31
Zic4Q61467 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms