Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcd1Q61466 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Haglr-201ENSMUST00000100000 2085 ntBASIC16.81■□□□□ 0.28
Smarcd1Q61466 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd1Q61466 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.8■□□□□ 0.28
Smarcd1Q61466 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.8■□□□□ 0.28
Smarcd1Q61466 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd1Q61466 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.79■□□□□ 0.28
Smarcd1Q61466 Mir8098-201ENSMUST00000184011 137 ntBASIC16.79■□□□□ 0.28
Smarcd1Q61466 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.79■□□□□ 0.28
Smarcd1Q61466 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Gm9172-201ENSMUST00000212092 954 ntBASIC16.79■□□□□ 0.28
Smarcd1Q61466 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd1Q61466 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Gm28659-201ENSMUST00000188013 759 ntBASIC16.78■□□□□ 0.28
Smarcd1Q61466 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.78■□□□□ 0.28
Smarcd1Q61466 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd1Q61466 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms