Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Clns1aQ61189 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.88□□□□□ -0.19
Clns1aQ61189 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Gm42545-201ENSMUST00000202755 922 ntBASIC13.88□□□□□ -0.19
Clns1aQ61189 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.88□□□□□ -0.19
Clns1aQ61189 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.88□□□□□ -0.19
Clns1aQ61189 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.88□□□□□ -0.19
Clns1aQ61189 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Dio3-201ENSMUST00000097228 1449 ntBASIC13.88□□□□□ -0.19
Clns1aQ61189 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Clns1aQ61189 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clns1aQ61189 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Clns1aQ61189 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.87□□□□□ -0.19
Clns1aQ61189 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.87□□□□□ -0.19
Clns1aQ61189 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clns1aQ61189 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.87□□□□□ -0.19
Clns1aQ61189 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.87□□□□□ -0.19
Clns1aQ61189 Gm27000-201ENSMUST00000182943 842 ntBASIC13.87□□□□□ -0.19
Clns1aQ61189 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Clns1aQ61189 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clns1aQ61189 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Clns1aQ61189 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Clns1aQ61189 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Gm12382-201ENSMUST00000122005 922 ntBASIC13.86□□□□□ -0.19
Clns1aQ61189 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.86□□□□□ -0.19
Clns1aQ61189 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Clns1aQ61189 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clns1aQ61189 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Clns1aQ61189 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Gm8495-201ENSMUST00000188740 694 ntBASIC13.85□□□□□ -0.19
Clns1aQ61189 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.85□□□□□ -0.19
Clns1aQ61189 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.85□□□□□ -0.19
Clns1aQ61189 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.85□□□□□ -0.19
Clns1aQ61189 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.85□□□□□ -0.19
Clns1aQ61189 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clns1aQ61189 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms