Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.06■□□□□ 0.8
Irf9Q61179 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.06■□□□□ 0.8
Irf9Q61179 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.06■□□□□ 0.8
Irf9Q61179 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Irf9Q61179 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Irf9Q61179 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Irf9Q61179 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Irf9Q61179 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Irf9Q61179 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.05■□□□□ 0.8
Irf9Q61179 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.05■□□□□ 0.8
Irf9Q61179 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Gm7230-201ENSMUST00000173026 815 ntBASIC20.05■□□□□ 0.8
Irf9Q61179 Gm6089-201ENSMUST00000197666 938 ntBASIC20.05■□□□□ 0.8
Irf9Q61179 Gm43514-201ENSMUST00000198852 424 ntBASIC20.05■□□□□ 0.8
Irf9Q61179 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.05■□□□□ 0.8
Irf9Q61179 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.05■□□□□ 0.8
Irf9Q61179 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Irf9Q61179 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.05■□□□□ 0.8
Irf9Q61179 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Irf9Q61179 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Irf9Q61179 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Irf9Q61179 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Gm12350-201ENSMUST00000121208 462 ntBASIC20.04■□□□□ 0.8
Irf9Q61179 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.04■□□□□ 0.8
Irf9Q61179 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Irf9Q61179 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.04■□□□□ 0.8
Irf9Q61179 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.04■□□□□ 0.8
Irf9Q61179 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm15173-201ENSMUST00000122049 433 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm8825-201ENSMUST00000182565 998 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm4518-201ENSMUST00000182638 718 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.03■□□□□ 0.8
Irf9Q61179 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.03■□□□□ 0.8
Irf9Q61179 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Irf9Q61179 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.02■□□□□ 0.8
Irf9Q61179 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.02■□□□□ 0.8
Irf9Q61179 Gm18622-201ENSMUST00000219361 595 ntBASIC20.02■□□□□ 0.8
Irf9Q61179 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.02■□□□□ 0.8
Irf9Q61179 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Irf9Q61179 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Irf9Q61179 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Irf9Q61179 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Irf9Q61179 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Irf9Q61179 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
Irf9Q61179 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms