Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.68■□□□□ 0.42
Cln3Q61124 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.67■□□□□ 0.42
Cln3Q61124 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.67■□□□□ 0.42
Cln3Q61124 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Cln3Q61124 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cln3Q61124 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.67■□□□□ 0.42
Cln3Q61124 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cln3Q61124 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cln3Q61124 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cln3Q61124 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.66■□□□□ 0.42
Cln3Q61124 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Gm27300-201ENSMUST00000184085 97 ntBASIC17.66■□□□□ 0.42
Cln3Q61124 Gm27335-201ENSMUST00000184758 97 ntBASIC17.66■□□□□ 0.42
Cln3Q61124 Mir8117-201ENSMUST00000184773 107 ntBASIC17.66■□□□□ 0.42
Cln3Q61124 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.66■□□□□ 0.42
Cln3Q61124 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.66■□□□□ 0.42
Cln3Q61124 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.66■□□□□ 0.42
Cln3Q61124 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.66■□□□□ 0.42
Cln3Q61124 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.66■□□□□ 0.42
Cln3Q61124 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cln3Q61124 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cln3Q61124 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.65■□□□□ 0.42
Cln3Q61124 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cln3Q61124 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cln3Q61124 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Cln3Q61124 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cln3Q61124 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.65■□□□□ 0.42
Cln3Q61124 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.65■□□□□ 0.42
Cln3Q61124 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.65■□□□□ 0.42
Cln3Q61124 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.65■□□□□ 0.42
Cln3Q61124 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cln3Q61124 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.65■□□□□ 0.42
Cln3Q61124 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cln3Q61124 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.65■□□□□ 0.42
Cln3Q61124 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cln3Q61124 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cln3Q61124 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cln3Q61124 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cln3Q61124 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cln3Q61124 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.64■□□□□ 0.41
Cln3Q61124 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Cln3Q61124 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
Cln3Q61124 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Cln3Q61124 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.64■□□□□ 0.41
Cln3Q61124 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cln3Q61124 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.64■□□□□ 0.41
Cln3Q61124 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.63■□□□□ 0.41
Cln3Q61124 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms