Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc6a4Q60857 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a4Q60857 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Slc6a4Q60857 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Slc6a4Q60857 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.52■□□□□ 0.23
Slc6a4Q60857 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc6a4Q60857 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
Slc6a4Q60857 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Slc6a4Q60857 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Slc6a4Q60857 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.51■□□□□ 0.23
Slc6a4Q60857 Gm44771-201ENSMUST00000206975 626 ntBASIC16.51■□□□□ 0.23
Slc6a4Q60857 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc6a4Q60857 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Gm4459-201ENSMUST00000118750 468 ntBASIC16.5■□□□□ 0.23
Slc6a4Q60857 Gm7862-201ENSMUST00000121461 292 ntBASIC16.5■□□□□ 0.23
Slc6a4Q60857 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a4Q60857 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.5■□□□□ 0.23
Slc6a4Q60857 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a4Q60857 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.49■□□□□ 0.23
Slc6a4Q60857 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a4Q60857 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a4Q60857 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a4Q60857 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc6a4Q60857 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a4Q60857 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms