Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atp13a4Q5XF90 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Gm27704-201ENSMUST00000185094 107 ntBASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Gm33142-201ENSMUST00000193913 867 ntBASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atp13a4Q5XF90 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Gm27742-201ENSMUST00000184667 60 ntBASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atp13a4Q5XF90 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Gm7284-201ENSMUST00000131667 944 ntBASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atp13a4Q5XF90 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Atp13a4Q5XF90 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp13a4Q5XF90 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp13a4Q5XF90 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms