Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Shroom1Q5SX79 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shroom1Q5SX79 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Gm6376-201ENSMUST00000209407 580 ntBASIC17.15■□□□□ 0.34
Shroom1Q5SX79 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shroom1Q5SX79 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shroom1Q5SX79 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shroom1Q5SX79 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44357-201ENSMUST00000195897 142 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm19658-201ENSMUST00000196231 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44367-201ENSMUST00000196836 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44350-201ENSMUST00000197197 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44390-201ENSMUST00000197533 144 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44313-201ENSMUST00000198018 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44486-201ENSMUST00000198508 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44314-201ENSMUST00000199263 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44394-201ENSMUST00000199558 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44484-201ENSMUST00000199873 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44466-201ENSMUST00000200264 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gm44359-201ENSMUST00000200671 138 ntBASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shroom1Q5SX79 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Gm2651-201ENSMUST00000203560 838 ntBASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shroom1Q5SX79 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms