Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Gm25745-201ENSMUST00000174945 133 ntBASIC19.38■□□□□ 0.69
Vps54Q5SPW0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps54Q5SPW0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.37■□□□□ 0.69
Vps54Q5SPW0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Gm43347-201ENSMUST00000200226 580 ntBASIC19.37■□□□□ 0.69
Vps54Q5SPW0 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps54Q5SPW0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps54Q5SPW0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Gm7506-201ENSMUST00000207758 815 ntBASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps54Q5SPW0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps54Q5SPW0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms