Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7d-4Q5R1H9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7d-4Q5R1H9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Gm5408-201ENSMUST00000197998 747 ntBASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7d-4Q5R1H9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Gm10138-203ENSMUST00000206952 366 ntBASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-4Q5R1H9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms