Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col27a1Q5QNQ9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Gm14127-201ENSMUST00000117906 678 ntBASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Gm7730-201ENSMUST00000212486 454 ntBASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col27a1Q5QNQ9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Gm6257-201ENSMUST00000163864 910 ntBASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Mir7684-201ENSMUST00000183858 60 ntBASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col27a1Q5QNQ9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Gm27618-201ENSMUST00000183671 60 ntBASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col27a1Q5QNQ9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Gm19164-201ENSMUST00000210667 640 ntBASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Col27a1Q5QNQ9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col27a1Q5QNQ9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.49■□□□□ 0.07
Col27a1Q5QNQ9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col27a1Q5QNQ9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.49■□□□□ 0.07
Col27a1Q5QNQ9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms