Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Gm8655-201ENSMUST00000221159 852 ntBASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Gm23935-201ENSMUST00000102303 57 ntBASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Gm24270-201ENSMUST00000102326 57 ntBASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Gm24245-201ENSMUST00000157318 57 ntBASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Gm27628-201ENSMUST00000184911 107 ntBASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf43Q5NCP0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Gm7222-201ENSMUST00000117512 906 ntBASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf43Q5NCP0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Gm4995-201ENSMUST00000117247 432 ntBASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Gm25406-201ENSMUST00000157599 105 ntBASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Gm24513-201ENSMUST00000174964 138 ntBASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rnf43Q5NCP0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.4■□□□□ 0.22
Rnf43Q5NCP0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms