Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm1Q52KI8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm1Q52KI8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Srrm1Q52KI8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm1Q52KI8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Srrm1Q52KI8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.08■□□□□ 0.49
Srrm1Q52KI8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm1Q52KI8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm1Q52KI8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm1Q52KI8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Srrm1Q52KI8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm1Q52KI8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Gm14701-201ENSMUST00000117156 348 ntBASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm1Q52KI8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm1Q52KI8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm1Q52KI8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Gm5682-201ENSMUST00000173402 505 ntBASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm1Q52KI8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms