Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Gm8097-201ENSMUST00000117903 829 ntBASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Gm2651-201ENSMUST00000203560 838 ntBASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rc3h1Q4VGL6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Gm12497-201ENSMUST00000138778 237 ntBASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Gm4535-201ENSMUST00000182274 558 ntBASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Gm10060-201ENSMUST00000212002 111 ntBASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Gm10355-201ENSMUST00000097146 517 ntBASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rc3h1Q4VGL6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Gm25990-201ENSMUST00000102440 86 ntBASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Gm11780-201ENSMUST00000136880 516 ntBASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rc3h1Q4VGL6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Gm9172-201ENSMUST00000212092 954 ntBASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rc3h1Q4VGL6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms