Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Gm10060-201ENSMUST00000212002 111 ntBASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lin28bQ45KJ6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lin28bQ45KJ6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Gm5867-201ENSMUST00000063197 592 ntBASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lin28bQ45KJ6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Gm13418-201ENSMUST00000119097 944 ntBASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lin28bQ45KJ6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Gm1401-201ENSMUST00000122048 772 ntBASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Gm36967-201ENSMUST00000193814 266 ntBASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lin28bQ45KJ6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.3■□□□□ 0.04
Lin28bQ45KJ6 Gm12350-201ENSMUST00000121208 462 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms