Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Rnf223Q3UV31 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf223Q3UV31 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf223Q3UV31 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf223Q3UV31 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rnf223Q3UV31 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Gm12497-201ENSMUST00000138778 237 ntBASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Gm19891-201ENSMUST00000189771 303 ntBASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Gm18195-201ENSMUST00000207604 706 ntBASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf223Q3UV31 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.63■□□□□ 0.09
Rnf223Q3UV31 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.63■□□□□ 0.09
Rnf223Q3UV31 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf223Q3UV31 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Gm8097-201ENSMUST00000117903 829 ntBASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Gm13418-201ENSMUST00000119097 944 ntBASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Gm4535-201ENSMUST00000182274 558 ntBASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Gm10355-201ENSMUST00000097146 517 ntBASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf223Q3UV31 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.61■□□□□ 0.09
Rnf223Q3UV31 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf223Q3UV31 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf223Q3UV31 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf223Q3UV31 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rnf223Q3UV31 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf223Q3UV31 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf223Q3UV31 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf223Q3UV31 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms